Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Brca1P48754 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brca1P48754 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.99□□□□□ -0.01
Brca1P48754 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brca1P48754 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Brca1P48754 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Brca1P48754 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.99□□□□□ -0.01
Brca1P48754 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brca1P48754 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brca1P48754 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brca1P48754 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brca1P48754 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.98□□□□□ -0.01
Brca1P48754 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.98□□□□□ -0.01
Brca1P48754 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.98□□□□□ -0.01
Brca1P48754 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.98□□□□□ -0.01
Brca1P48754 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.98□□□□□ -0.01
Brca1P48754 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.98□□□□□ -0.01
Brca1P48754 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brca1P48754 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Brca1P48754 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Brca1P48754 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Brca1P48754 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Brca1P48754 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.97□□□□□ -0.01
Brca1P48754 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Brca1P48754 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Brca1P48754 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.97□□□□□ -0.01
Brca1P48754 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Gm44262-201ENSMUST00000204969 372 ntBASIC14.97□□□□□ -0.01
Brca1P48754 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.97□□□□□ -0.01
Brca1P48754 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.97□□□□□ -0.01
Brca1P48754 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
Brca1P48754 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.97□□□□□ -0.01
Brca1P48754 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Brca1P48754 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brca1P48754 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Brca1P48754 Gm11531-201ENSMUST00000117614 555 ntBASIC14.96□□□□□ -0.01
Brca1P48754 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Brca1P48754 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.96□□□□□ -0.01
Brca1P48754 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.96□□□□□ -0.01
Brca1P48754 Gm5051-201ENSMUST00000204085 485 ntBASIC14.96□□□□□ -0.01
Brca1P48754 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Brca1P48754 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.96□□□□□ -0.01
Brca1P48754 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Brca1P48754 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.96□□□□□ -0.01
Brca1P48754 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.96□□□□□ -0.01
Brca1P48754 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.96□□□□□ -0.01
Brca1P48754 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.96□□□□□ -0.01
Brca1P48754 Gm25700-201ENSMUST00000177693 110 ntBASIC14.96□□□□□ -0.01
Brca1P48754 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.96□□□□□ -0.01
Brca1P48754 Gm44126-201ENSMUST00000204831 514 ntBASIC14.96□□□□□ -0.01
Brca1P48754 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.96□□□□□ -0.01
Brca1P48754 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brca1P48754 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brca1P48754 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Brca1P48754 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Brca1P48754 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms