Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Prox1P48437 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.08□□□□□ -0.32
Prox1P48437 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.07□□□□□ -0.32
Prox1P48437 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Gm11025-201ENSMUST00000140773 466 ntBASIC13.07□□□□□ -0.32
Prox1P48437 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Mir3113-201ENSMUST00000175478 76 ntBASIC13.07□□□□□ -0.32
Prox1P48437 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Prox1P48437 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.07□□□□□ -0.32
Prox1P48437 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prox1P48437 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Prox1P48437 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.07□□□□□ -0.32
Prox1P48437 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Prox1P48437 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Prox1P48437 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.06□□□□□ -0.32
Prox1P48437 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.06□□□□□ -0.32
Prox1P48437 Gm14822-201ENSMUST00000122247 291 ntBASIC13.06□□□□□ -0.32
Prox1P48437 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.06□□□□□ -0.32
Prox1P48437 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.06□□□□□ -0.32
Prox1P48437 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Prox1P48437 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Prox1P48437 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prox1P48437 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prox1P48437 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Prox1P48437 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms