Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.83□□□□□ -0.2
Vps4bP46467 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.83□□□□□ -0.2
Vps4bP46467 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.83□□□□□ -0.2
Vps4bP46467 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.83□□□□□ -0.2
Vps4bP46467 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Vps4bP46467 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.83□□□□□ -0.2
Vps4bP46467 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.83□□□□□ -0.2
Vps4bP46467 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.83□□□□□ -0.2
Vps4bP46467 Gm46209-201ENSMUST00000217912 553 ntBASIC13.83□□□□□ -0.2
Vps4bP46467 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.83□□□□□ -0.2
Vps4bP46467 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vps4bP46467 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.82□□□□□ -0.2
Vps4bP46467 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vps4bP46467 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Vps4bP46467 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Vps4bP46467 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.82□□□□□ -0.2
Vps4bP46467 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.82□□□□□ -0.2
Vps4bP46467 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Vps4bP46467 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps4bP46467 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps4bP46467 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Gm8927-201ENSMUST00000181978 981 ntBASIC13.82□□□□□ -0.2
Vps4bP46467 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps4bP46467 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Gm3222-201ENSMUST00000071282 990 ntBASIC13.82□□□□□ -0.2
Vps4bP46467 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps4bP46467 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vps4bP46467 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps4bP46467 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps4bP46467 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps4bP46467 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.81□□□□□ -0.2
Vps4bP46467 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps4bP46467 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Gm12585-201ENSMUST00000117307 290 ntBASIC13.81□□□□□ -0.2
Vps4bP46467 Gm13385-201ENSMUST00000121089 220 ntBASIC13.81□□□□□ -0.2
Vps4bP46467 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.81□□□□□ -0.2
Vps4bP46467 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps4bP46467 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Vps4bP46467 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps4bP46467 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.81□□□□□ -0.2
Vps4bP46467 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps4bP46467 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Vps4bP46467 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps4bP46467 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps4bP46467 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms