Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.93□□□□□ -0.18
Cxcl12P40224 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Gm14130-201ENSMUST00000118417 987 ntBASIC13.93□□□□□ -0.18
Cxcl12P40224 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cxcl12P40224 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Gm44967-201ENSMUST00000207047 631 ntBASIC13.93□□□□□ -0.18
Cxcl12P40224 Gm13097-201ENSMUST00000210722 397 ntBASIC13.93□□□□□ -0.18
Cxcl12P40224 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.93□□□□□ -0.18
Cxcl12P40224 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.93□□□□□ -0.18
Cxcl12P40224 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cxcl12P40224 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cxcl12P40224 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.92□□□□□ -0.18
Cxcl12P40224 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.92□□□□□ -0.18
Cxcl12P40224 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl12P40224 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl12P40224 Gm12363-201ENSMUST00000122250 668 ntBASIC13.92□□□□□ -0.18
Cxcl12P40224 Mir6927-201ENSMUST00000184494 71 ntBASIC13.92□□□□□ -0.18
Cxcl12P40224 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 AU022133-201ENSMUST00000200601 873 ntBASIC13.92□□□□□ -0.18
Cxcl12P40224 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.92□□□□□ -0.18
Cxcl12P40224 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.92□□□□□ -0.18
Cxcl12P40224 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.92□□□□□ -0.18
Cxcl12P40224 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl12P40224 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl12P40224 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl12P40224 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl12P40224 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm12217-201ENSMUST00000118858 696 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm15276-201ENSMUST00000145953 498 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.91□□□□□ -0.18
Cxcl12P40224 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm8738-201ENSMUST00000172606 329 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm5523-201ENSMUST00000180415 997 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm8959-201ENSMUST00000213150 571 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.91□□□□□ -0.18
Cxcl12P40224 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms