Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Timp3P39876 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Timp3P39876 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Timp3P39876 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.18□□□□□ -0.62
Timp3P39876 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.18□□□□□ -0.62
Timp3P39876 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Timp3P39876 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.18□□□□□ -0.62
Timp3P39876 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.18□□□□□ -0.62
Timp3P39876 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.18□□□□□ -0.62
Timp3P39876 Gm43433-201ENSMUST00000196573 481 ntBASIC11.18□□□□□ -0.62
Timp3P39876 Gm9908-201ENSMUST00000211534 448 ntBASIC11.18□□□□□ -0.62
Timp3P39876 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Timp3P39876 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Timp3P39876 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Timp3P39876 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Timp3P39876 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Timp3P39876 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.18□□□□□ -0.62
Timp3P39876 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.18□□□□□ -0.62
Timp3P39876 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Timp3P39876 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.18□□□□□ -0.62
Timp3P39876 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timp3P39876 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.17□□□□□ -0.62
Timp3P39876 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.17□□□□□ -0.62
Timp3P39876 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.17□□□□□ -0.62
Timp3P39876 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.17□□□□□ -0.62
Timp3P39876 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Timp3P39876 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.17□□□□□ -0.62
Timp3P39876 Gm11918-201ENSMUST00000121660 179 ntBASIC11.17□□□□□ -0.62
Timp3P39876 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Timp3P39876 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.17□□□□□ -0.62
Timp3P39876 Gm5279-201ENSMUST00000199575 745 ntBASIC11.17□□□□□ -0.62
Timp3P39876 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.17□□□□□ -0.62
Timp3P39876 Gm18027-201ENSMUST00000218947 619 ntBASIC11.17□□□□□ -0.62
Timp3P39876 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.17□□□□□ -0.62
Timp3P39876 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms