Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.62□□□□□ -0.39
Thbs1P35441 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.62□□□□□ -0.39
Thbs1P35441 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.62□□□□□ -0.39
Thbs1P35441 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs1P35441 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs1P35441 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Thbs1P35441 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Thbs1P35441 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.62□□□□□ -0.39
Thbs1P35441 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thbs1P35441 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Thbs1P35441 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thbs1P35441 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Thbs1P35441 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.61□□□□□ -0.39
Thbs1P35441 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.61□□□□□ -0.39
Thbs1P35441 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.61□□□□□ -0.39
Thbs1P35441 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm15770-201ENSMUST00000117498 584 ntBASIC12.61□□□□□ -0.39
Thbs1P35441 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm4875-201ENSMUST00000118257 786 ntBASIC12.61□□□□□ -0.39
Thbs1P35441 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm27772-201ENSMUST00000184900 187 ntBASIC12.61□□□□□ -0.39
Thbs1P35441 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm18905-201ENSMUST00000205454 928 ntBASIC12.61□□□□□ -0.39
Thbs1P35441 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.61□□□□□ -0.39
Thbs1P35441 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.61□□□□□ -0.39
Thbs1P35441 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Thbs1P35441 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.61□□□□□ -0.39
Thbs1P35441 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thbs1P35441 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Thbs1P35441 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Thbs1P35441 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Thbs1P35441 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.6□□□□□ -0.39
Thbs1P35441 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Thbs1P35441 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Thbs1P35441 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Thbs1P35441 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Gm27437-201ENSMUST00000183429 107 ntBASIC12.6□□□□□ -0.39
Thbs1P35441 Gm36991-201ENSMUST00000191800 648 ntBASIC12.6□□□□□ -0.39
Thbs1P35441 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.6□□□□□ -0.39
Thbs1P35441 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.6□□□□□ -0.39
Thbs1P35441 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.6□□□□□ -0.39
Thbs1P35441 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thbs1P35441 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms