Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Sftpa1P35242 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sftpa1P35242 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.54□□□□□ -0.4
Sftpa1P35242 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm15770-201ENSMUST00000117498 584 ntBASIC12.53□□□□□ -0.4
Sftpa1P35242 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm2383-201ENSMUST00000181461 807 ntBASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm6082-201ENSMUST00000215204 454 ntBASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm17330-201ENSMUST00000221047 165 ntBASIC12.53□□□□□ -0.4
Sftpa1P35242 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.53□□□□□ -0.4
Sftpa1P35242 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.53□□□□□ -0.4
Sftpa1P35242 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.53□□□□□ -0.4
Sftpa1P35242 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sftpa1P35242 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Sftpa1P35242 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sftpa1P35242 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Sftpa1P35242 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.52□□□□□ -0.41
Sftpa1P35242 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Gm11618-201ENSMUST00000117946 267 ntBASIC12.52□□□□□ -0.41
Sftpa1P35242 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.52□□□□□ -0.41
Sftpa1P35242 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.52□□□□□ -0.41
Sftpa1P35242 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.52□□□□□ -0.41
Sftpa1P35242 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.52□□□□□ -0.41
Sftpa1P35242 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.52□□□□□ -0.41
Sftpa1P35242 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sftpa1P35242 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.52□□□□□ -0.41
Sftpa1P35242 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sftpa1P35242 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sftpa1P35242 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.51□□□□□ -0.41
Sftpa1P35242 Gm12997-201ENSMUST00000120207 640 ntBASIC12.51□□□□□ -0.41
Sftpa1P35242 Gm14381-201ENSMUST00000122105 414 ntBASIC12.51□□□□□ -0.41
Sftpa1P35242 Gm13123-201ENSMUST00000122173 492 ntBASIC12.51□□□□□ -0.41
Sftpa1P35242 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sftpa1P35242 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sftpa1P35242 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.51□□□□□ -0.41
Sftpa1P35242 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms