Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcam1P29533 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vcam1P29533 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcam1P29533 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Vcam1P29533 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vcam1P29533 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.56■□□□□ 0.08
Vcam1P29533 Gm8805-201ENSMUST00000117848 313 ntBASIC15.56■□□□□ 0.08
Vcam1P29533 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.56■□□□□ 0.08
Vcam1P29533 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.56■□□□□ 0.08
Vcam1P29533 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.56■□□□□ 0.08
Vcam1P29533 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.56■□□□□ 0.08
Vcam1P29533 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.56■□□□□ 0.08
Vcam1P29533 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.56■□□□□ 0.08
Vcam1P29533 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcam1P29533 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.55■□□□□ 0.08
Vcam1P29533 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.55■□□□□ 0.08
Vcam1P29533 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.55■□□□□ 0.08
Vcam1P29533 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.55■□□□□ 0.08
Vcam1P29533 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.55■□□□□ 0.08
Vcam1P29533 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vcam1P29533 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcam1P29533 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vcam1P29533 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.54■□□□□ 0.08
Vcam1P29533 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.54■□□□□ 0.08
Vcam1P29533 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Gm6222-202ENSMUST00000182143 629 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Gm27501-201ENSMUST00000183599 107 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Gm43133-201ENSMUST00000197472 463 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.54■□□□□ 0.08
Vcam1P29533 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.54■□□□□ 0.08
Vcam1P29533 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vcam1P29533 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vcam1P29533 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms