Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.19□□□□□ -0.14
H2afxP27661 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.19□□□□□ -0.14
H2afxP27661 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.19□□□□□ -0.14
H2afxP27661 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H2afxP27661 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.19□□□□□ -0.14
H2afxP27661 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
H2afxP27661 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afxP27661 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
H2afxP27661 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.18□□□□□ -0.14
H2afxP27661 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
H2afxP27661 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.18□□□□□ -0.14
H2afxP27661 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.18□□□□□ -0.14
H2afxP27661 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.18□□□□□ -0.14
H2afxP27661 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.18□□□□□ -0.14
H2afxP27661 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.18□□□□□ -0.14
H2afxP27661 Gm23634-201ENSMUST00000175071 91 ntBASIC14.18□□□□□ -0.14
H2afxP27661 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.18□□□□□ -0.14
H2afxP27661 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.18□□□□□ -0.14
H2afxP27661 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
H2afxP27661 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
H2afxP27661 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.18□□□□□ -0.14
H2afxP27661 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.18□□□□□ -0.14
H2afxP27661 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.18□□□□□ -0.14
H2afxP27661 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H2afxP27661 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H2afxP27661 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afxP27661 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
H2afxP27661 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
H2afxP27661 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.17□□□□□ -0.14
H2afxP27661 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afxP27661 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.17□□□□□ -0.14
H2afxP27661 Gm10231-201ENSMUST00000181584 441 ntBASIC14.17□□□□□ -0.14
H2afxP27661 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Gm10175-202ENSMUST00000208752 441 ntBASIC14.17□□□□□ -0.14
H2afxP27661 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.17□□□□□ -0.14
H2afxP27661 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
H2afxP27661 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afxP27661 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.17□□□□□ -0.14
H2afxP27661 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afxP27661 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.16□□□□□ -0.14
H2afxP27661 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
H2afxP27661 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afxP27661 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.16□□□□□ -0.14
H2afxP27661 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H2afxP27661 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afxP27661 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afxP27661 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afxP27661 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms