Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.59□□□□□ -0.39
Cd40lgP27548 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm24694-201ENSMUST00000180054 110 ntBASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm27663-201ENSMUST00000184839 110 ntBASIC12.59□□□□□ -0.39
Cd40lgP27548 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm37714-201ENSMUST00000194742 342 ntBASIC12.59□□□□□ -0.39
Cd40lgP27548 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.59□□□□□ -0.39
Cd40lgP27548 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd40lgP27548 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.59□□□□□ -0.39
Cd40lgP27548 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cd40lgP27548 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cd40lgP27548 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cd40lgP27548 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.58□□□□□ -0.39
Cd40lgP27548 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.58□□□□□ -0.4
Cd40lgP27548 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Gm9522-201ENSMUST00000182394 926 ntBASIC12.58□□□□□ -0.4
Cd40lgP27548 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.58□□□□□ -0.4
Cd40lgP27548 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Gm44855-201ENSMUST00000205725 362 ntBASIC12.58□□□□□ -0.4
Cd40lgP27548 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.58□□□□□ -0.4
Cd40lgP27548 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cd40lgP27548 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd40lgP27548 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cd40lgP27548 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd40lgP27548 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd40lgP27548 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd40lgP27548 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms