Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
BdnfP21237 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BdnfP21237 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
BdnfP21237 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BdnfP21237 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.08□□□□□ -0.31
BdnfP21237 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BdnfP21237 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
BdnfP21237 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
BdnfP21237 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
BdnfP21237 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
BdnfP21237 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Gm25287-201ENSMUST00000103846 110 ntBASIC13.08□□□□□ -0.32
BdnfP21237 Gm22918-201ENSMUST00000103855 110 ntBASIC13.08□□□□□ -0.32
BdnfP21237 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.08□□□□□ -0.32
BdnfP21237 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.08□□□□□ -0.32
BdnfP21237 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.08□□□□□ -0.32
BdnfP21237 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 AA619741-201ENSMUST00000195095 646 ntBASIC13.08□□□□□ -0.32
BdnfP21237 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.08□□□□□ -0.32
BdnfP21237 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
BdnfP21237 Mir125a-201ENSMUST00000083545 68 ntBASIC13.08□□□□□ -0.32
BdnfP21237 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BdnfP21237 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
BdnfP21237 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
BdnfP21237 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.08□□□□□ -0.32
BdnfP21237 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BdnfP21237 Gm37057-201ENSMUST00000192624 1916 ntBASIC13.07□□□□□ -0.32
BdnfP21237 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.07□□□□□ -0.32
BdnfP21237 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BdnfP21237 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.07□□□□□ -0.32
BdnfP21237 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.07□□□□□ -0.32
BdnfP21237 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.07□□□□□ -0.32
BdnfP21237 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.07□□□□□ -0.32
BdnfP21237 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
BdnfP21237 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
BdnfP21237 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BdnfP21237 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.07□□□□□ -0.32
BdnfP21237 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
BdnfP21237 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
BdnfP21237 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
BdnfP21237 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
BdnfP21237 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.06□□□□□ -0.32
BdnfP21237 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.06□□□□□ -0.32
BdnfP21237 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BdnfP21237 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
BdnfP21237 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BdnfP21237 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.06□□□□□ -0.32
BdnfP21237 AA543401-201ENSMUST00000164248 1269 ntBASIC13.06□□□□□ -0.32
BdnfP21237 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.06□□□□□ -0.32
BdnfP21237 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.06□□□□□ -0.32
BdnfP21237 Gm29741-201ENSMUST00000192667 421 ntBASIC13.06□□□□□ -0.32
BdnfP21237 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.06□□□□□ -0.32
BdnfP21237 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms