Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.32■□□□□ 0.36
Prim1P20664 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Prim1P20664 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prim1P20664 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.31■□□□□ 0.36
Prim1P20664 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prim1P20664 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.31■□□□□ 0.36
Prim1P20664 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Gm23931-201ENSMUST00000103842 109 ntBASIC17.31■□□□□ 0.36
Prim1P20664 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.31■□□□□ 0.36
Prim1P20664 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Prim1P20664 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.31■□□□□ 0.36
Prim1P20664 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.31■□□□□ 0.36
Prim1P20664 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.31■□□□□ 0.36
Prim1P20664 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.31■□□□□ 0.36
Prim1P20664 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Prim1P20664 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.31■□□□□ 0.36
Prim1P20664 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.31■□□□□ 0.36
Prim1P20664 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.31■□□□□ 0.36
Prim1P20664 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.31■□□□□ 0.36
Prim1P20664 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prim1P20664 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC17.3■□□□□ 0.36
Prim1P20664 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Gm27331-201ENSMUST00000183705 60 ntBASIC17.3■□□□□ 0.36
Prim1P20664 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.3■□□□□ 0.36
Prim1P20664 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC17.3■□□□□ 0.36
Prim1P20664 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Prim1P20664 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.3■□□□□ 0.36
Prim1P20664 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Prim1P20664 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.3■□□□□ 0.36
Prim1P20664 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prim1P20664 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Prim1P20664 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.29■□□□□ 0.36
Prim1P20664 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.29■□□□□ 0.36
Prim1P20664 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC17.29■□□□□ 0.36
Prim1P20664 Gm29107-201ENSMUST00000190910 347 ntBASIC17.29■□□□□ 0.36
Prim1P20664 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Prim1P20664 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.29■□□□□ 0.36
Prim1P20664 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prim1P20664 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.29■□□□□ 0.36
Prim1P20664 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prim1P20664 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prim1P20664 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prim1P20664 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.28■□□□□ 0.36
Prim1P20664 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prim1P20664 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prim1P20664 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prim1P20664 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms