Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm29269-201ENSMUST00000190087 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21722-201ENSMUST00000190153 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm28423-201ENSMUST00000190701 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21899-201ENSMUST00000190745 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21910-201ENSMUST00000191163 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21849-201ENSMUST00000191571 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm28678-201ENSMUST00000191593 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm20910-201ENSMUST00000193268 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm21871-201ENSMUST00000194621 696 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm5035-201ENSMUST00000215581 927 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfrsf9P20334 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Gm5244-202ENSMUST00000189517 743 ntBASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.24□□□□□ -0.61
Tnfrsf9P20334 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfrsf9P20334 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf9P20334 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms