Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Gm23935-201ENSMUST00000102303 57 ntBASIC13.18□□□□□ -0.3
Fv4P11370 Gm24270-201ENSMUST00000102326 57 ntBASIC13.18□□□□□ -0.3
Fv4P11370 Gm14767-201ENSMUST00000121559 586 ntBASIC13.18□□□□□ -0.3
Fv4P11370 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.18□□□□□ -0.3
Fv4P11370 Gm24245-201ENSMUST00000157318 57 ntBASIC13.18□□□□□ -0.3
Fv4P11370 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Gm27321-201ENSMUST00000185021 205 ntBASIC13.18□□□□□ -0.3
Fv4P11370 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.18□□□□□ -0.3
Fv4P11370 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.18□□□□□ -0.3
Fv4P11370 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fv4P11370 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Fv4P11370 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Gm14701-201ENSMUST00000117156 348 ntBASIC13.17□□□□□ -0.3
Fv4P11370 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.17□□□□□ -0.3
Fv4P11370 Gm22175-201ENSMUST00000175007 78 ntBASIC13.17□□□□□ -0.3
Fv4P11370 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.17□□□□□ -0.3
Fv4P11370 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Fv4P11370 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Fv4P11370 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fv4P11370 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.17□□□□□ -0.3
Fv4P11370 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Fv4P11370 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Gm38294-201ENSMUST00000192831 381 ntBASIC13.16□□□□□ -0.3
Fv4P11370 Gm43575-201ENSMUST00000196420 516 ntBASIC13.16□□□□□ -0.3
Fv4P11370 Gm6888-201ENSMUST00000221983 706 ntBASIC13.16□□□□□ -0.3
Fv4P11370 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.16□□□□□ -0.3
Fv4P11370 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fv4P11370 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fv4P11370 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.15□□□□□ -0.3
Fv4P11370 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Fv4P11370 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fv4P11370 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.15□□□□□ -0.3
Fv4P11370 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms