Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.98□□□□□ -0.33
Lire1P11260 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.98□□□□□ -0.33
Lire1P11260 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lire1P11260 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.98□□□□□ -0.33
Lire1P11260 Gm13823-201ENSMUST00000119930 345 ntBASIC12.98□□□□□ -0.33
Lire1P11260 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.98□□□□□ -0.33
Lire1P11260 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lire1P11260 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.98□□□□□ -0.33
Lire1P11260 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.98□□□□□ -0.33
Lire1P11260 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.98□□□□□ -0.33
Lire1P11260 Gm6888-201ENSMUST00000221983 706 ntBASIC12.98□□□□□ -0.33
Lire1P11260 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Lire1P11260 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.98□□□□□ -0.33
Lire1P11260 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lire1P11260 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.97□□□□□ -0.33
Lire1P11260 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Lire1P11260 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lire1P11260 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lire1P11260 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lire1P11260 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lire1P11260 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lire1P11260 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Lire1P11260 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.97□□□□□ -0.33
Lire1P11260 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.97□□□□□ -0.33
Lire1P11260 Gm28631-201ENSMUST00000190740 334 ntBASIC12.97□□□□□ -0.33
Lire1P11260 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lire1P11260 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.97□□□□□ -0.33
Lire1P11260 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lire1P11260 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lire1P11260 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lire1P11260 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lire1P11260 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.96□□□□□ -0.33
Lire1P11260 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lire1P11260 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Lire1P11260 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Gm27680-201ENSMUST00000184192 160 ntBASIC12.96□□□□□ -0.33
Lire1P11260 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.96□□□□□ -0.33
Lire1P11260 Gm28630-201ENSMUST00000187806 498 ntBASIC12.96□□□□□ -0.33
Lire1P11260 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.96□□□□□ -0.33
Lire1P11260 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lire1P11260 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms