Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Ccl3P10855 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ccl3P10855 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Ccl3P10855 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl3P10855 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccl3P10855 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ccl3P10855 Gm15236-201ENSMUST00000117309 379 ntBASIC11.97□□□□□ -0.49
Ccl3P10855 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ccl3P10855 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccl3P10855 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.97□□□□□ -0.49
Ccl3P10855 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Gm45865-201ENSMUST00000211815 945 ntBASIC11.97□□□□□ -0.49
Ccl3P10855 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ccl3P10855 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccl3P10855 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.97□□□□□ -0.49
Ccl3P10855 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccl3P10855 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.96□□□□□ -0.49
Ccl3P10855 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Ccl3P10855 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.96□□□□□ -0.49
Ccl3P10855 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Ccl3P10855 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Gm6222-202ENSMUST00000182143 629 ntBASIC11.96□□□□□ -0.49
Ccl3P10855 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Gm44069-201ENSMUST00000204898 506 ntBASIC11.96□□□□□ -0.49
Ccl3P10855 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Gm10608-202ENSMUST00000213924 676 ntBASIC11.96□□□□□ -0.49
Ccl3P10855 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.96□□□□□ -0.49
Ccl3P10855 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccl3P10855 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccl3P10855 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccl3P10855 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl3P10855 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl3P10855 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ccl3P10855 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl3P10855 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl3P10855 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
Ccl3P10855 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl3P10855 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.96□□□□□ -0.5
Ccl3P10855 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.96□□□□□ -0.5
Ccl3P10855 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl3P10855 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccl3P10855 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms