Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Col4a2P08122 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Col4a2P08122 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Col4a2P08122 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col4a2P08122 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Gm26185-201ENSMUST00000157692 266 ntBASIC12.42□□□□□ -0.42
Col4a2P08122 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.42□□□□□ -0.42
Col4a2P08122 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.42□□□□□ -0.42
Col4a2P08122 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.42□□□□□ -0.42
Col4a2P08122 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Col4a2P08122 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a2P08122 AC122335.2-201ENSMUST00000213901 6181 ntBASIC12.42□□□□□ -0.42
Col4a2P08122 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col4a2P08122 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Col4a2P08122 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col4a2P08122 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col4a2P08122 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Gm24830-201ENSMUST00000102024 166 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col4a2P08122 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Gm25890-201ENSMUST00000177643 165 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Gm22614-201ENSMUST00000178300 165 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Col4a2P08122 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Gm32025-201ENSMUST00000217960 307 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.41□□□□□ -0.42
Col4a2P08122 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Gm22042-201ENSMUST00000082989 165 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Gm26232-201ENSMUST00000083360 166 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Gm24136-201ENSMUST00000083374 165 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Gm26110-201ENSMUST00000083971 165 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col4a2P08122 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.41□□□□□ -0.42
Col4a2P08122 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col4a2P08122 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col4a2P08122 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a2P08122 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.4□□□□□ -0.42
Col4a2P08122 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Gm11439-201ENSMUST00000118598 409 ntBASIC12.4□□□□□ -0.42
Col4a2P08122 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a2P08122 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.4□□□□□ -0.42
Col4a2P08122 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a2P08122 Mospd4-201ENSMUST00000180618 576 ntBASIC12.4□□□□□ -0.42
Col4a2P08122 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Gm30285-201ENSMUST00000214614 422 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms