Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TnfP06804 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TnfP06804 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.41□□□□□ -0.1
TnfP06804 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TnfP06804 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TnfP06804 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.41□□□□□ -0.1
TnfP06804 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.41□□□□□ -0.1
TnfP06804 Gm11803-201ENSMUST00000119966 444 ntBASIC14.41□□□□□ -0.1
TnfP06804 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.41□□□□□ -0.1
TnfP06804 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.41□□□□□ -0.1
TnfP06804 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.41□□□□□ -0.1
TnfP06804 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.41□□□□□ -0.1
TnfP06804 Gm8598-201ENSMUST00000221184 836 ntBASIC14.41□□□□□ -0.1
TnfP06804 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.41□□□□□ -0.1
TnfP06804 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TnfP06804 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TnfP06804 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TnfP06804 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.41□□□□□ -0.1
TnfP06804 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.4□□□□□ -0.1
TnfP06804 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.4□□□□□ -0.1
TnfP06804 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TnfP06804 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.4□□□□□ -0.1
TnfP06804 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TnfP06804 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TnfP06804 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TnfP06804 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.4□□□□□ -0.1
TnfP06804 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.4□□□□□ -0.1
TnfP06804 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.4□□□□□ -0.1
TnfP06804 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.4□□□□□ -0.1
TnfP06804 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TnfP06804 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TnfP06804 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TnfP06804 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TnfP06804 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TnfP06804 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.39□□□□□ -0.11
TnfP06804 Gm24644-201ENSMUST00000157114 139 ntBASIC14.39□□□□□ -0.11
TnfP06804 Gm22331-201ENSMUST00000158066 136 ntBASIC14.39□□□□□ -0.11
TnfP06804 Gm8810-201ENSMUST00000172895 754 ntBASIC14.39□□□□□ -0.11
TnfP06804 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.39□□□□□ -0.11
TnfP06804 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 AY702102-202ENSMUST00000194651 1173 ntBASIC14.39□□□□□ -0.11
TnfP06804 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.39□□□□□ -0.11
TnfP06804 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.39□□□□□ -0.11
TnfP06804 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.39□□□□□ -0.11
TnfP06804 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms