Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Hoxa3P02831 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Gm13385-201ENSMUST00000121089 220 ntBASIC11.43□□□□□ -0.58
Hoxa3P02831 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Hoxa3P02831 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxa3P02831 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.43□□□□□ -0.58
Hoxa3P02831 Mir497b-201ENSMUST00000093601 125 ntBASIC11.43□□□□□ -0.58
Hoxa3P02831 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hoxa3P02831 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxa3P02831 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm11478-201ENSMUST00000117851 599 ntBASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.42□□□□□ -0.58
Hoxa3P02831 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm8927-201ENSMUST00000181978 981 ntBASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm18187-201ENSMUST00000196476 984 ntBASIC11.42□□□□□ -0.58
Hoxa3P02831 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm18905-201ENSMUST00000205454 928 ntBASIC11.42□□□□□ -0.58
Hoxa3P02831 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Gm3222-201ENSMUST00000071282 990 ntBASIC11.42□□□□□ -0.58
Hoxa3P02831 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxa3P02831 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.42□□□□□ -0.58
Hoxa3P02831 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.41□□□□□ -0.58
Hoxa3P02831 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxa3P02831 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.41□□□□□ -0.58
Hoxa3P02831 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hoxa3P02831 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxa3P02831 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.41□□□□□ -0.58
Hoxa3P02831 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxa3P02831 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.41□□□□□ -0.58
Hoxa3P02831 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.41□□□□□ -0.58
Hoxa3P02831 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxa3P02831 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.41□□□□□ -0.58
Hoxa3P02831 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.41□□□□□ -0.58
Hoxa3P02831 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Hoxa3P02831 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms