Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.47□□□□□ -0.41
P01852 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.47□□□□□ -0.41
P01852 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
P01852 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.47□□□□□ -0.41
P01852 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
P01852 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
P01852 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
P01852 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
P01852 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.46□□□□□ -0.41
P01852 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.46□□□□□ -0.41
P01852 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.46□□□□□ -0.41
P01852 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
P01852 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.46□□□□□ -0.41
P01852 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.46□□□□□ -0.41
P01852 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.46□□□□□ -0.41
P01852 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.46□□□□□ -0.41
P01852 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.46□□□□□ -0.41
P01852 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
P01852 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.46□□□□□ -0.41
P01852 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P01852 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
P01852 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
P01852 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P01852 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.46□□□□□ -0.42
P01852 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P01852 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.45□□□□□ -0.42
P01852 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.45□□□□□ -0.42
P01852 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.45□□□□□ -0.42
P01852 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.45□□□□□ -0.42
P01852 Gm37917-201ENSMUST00000194711 392 ntBASIC12.45□□□□□ -0.42
P01852 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P01852 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.45□□□□□ -0.42
P01852 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
P01852 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.45□□□□□ -0.42
P01852 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
P01852 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P01852 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms