Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
TcraP01849 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.93□□□□□ -0.82
TcraP01849 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.93□□□□□ -0.82
TcraP01849 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.93□□□□□ -0.82
TcraP01849 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.93□□□□□ -0.82
TcraP01849 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.93□□□□□ -0.82
TcraP01849 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.93□□□□□ -0.82
TcraP01849 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.93□□□□□ -0.82
TcraP01849 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.93□□□□□ -0.82
TcraP01849 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
TcraP01849 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
TcraP01849 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.93□□□□□ -0.82
TcraP01849 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
TcraP01849 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.92□□□□□ -0.82
TcraP01849 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
TcraP01849 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Gm13036-201ENSMUST00000117799 748 ntBASIC9.92□□□□□ -0.82
TcraP01849 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.92□□□□□ -0.82
TcraP01849 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Mir5131-201ENSMUST00000175426 93 ntBASIC9.92□□□□□ -0.82
TcraP01849 Gm4899-201ENSMUST00000178708 719 ntBASIC9.92□□□□□ -0.82
TcraP01849 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.92□□□□□ -0.82
TcraP01849 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.92□□□□□ -0.82
TcraP01849 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC9.92□□□□□ -0.82
TcraP01849 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.92□□□□□ -0.82
TcraP01849 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.92□□□□□ -0.82
TcraP01849 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
TcraP01849 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
TcraP01849 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms