Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm14277-201ENSMUST00000121195 360 ntBASIC13.98□□□□□ -0.17
Syn1O88935 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Syn1O88935 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.98□□□□□ -0.17
Syn1O88935 Gm45186-201ENSMUST00000206874 478 ntBASIC13.98□□□□□ -0.17
Syn1O88935 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.98□□□□□ -0.17
Syn1O88935 Gm8959-201ENSMUST00000213150 571 ntBASIC13.98□□□□□ -0.17
Syn1O88935 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Syn1O88935 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
Syn1O88935 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.98□□□□□ -0.17
Syn1O88935 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syn1O88935 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Syn1O88935 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Syn1O88935 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Syn1O88935 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Syn1O88935 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Syn1O88935 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.97□□□□□ -0.17
Syn1O88935 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.97□□□□□ -0.17
Syn1O88935 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Syn1O88935 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Syn1O88935 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.97□□□□□ -0.17
Syn1O88935 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.97□□□□□ -0.17
Syn1O88935 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.97□□□□□ -0.17
Syn1O88935 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Syn1O88935 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.97□□□□□ -0.17
Syn1O88935 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.97□□□□□ -0.17
Syn1O88935 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.97□□□□□ -0.17
Syn1O88935 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Syn1O88935 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Syn1O88935 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Syn1O88935 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syn1O88935 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Syn1O88935 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.96□□□□□ -0.17
Syn1O88935 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.96□□□□□ -0.17
Syn1O88935 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.96□□□□□ -0.17
Syn1O88935 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Gm11628-201ENSMUST00000117568 171 ntBASIC13.96□□□□□ -0.17
Syn1O88935 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.96□□□□□ -0.17
Syn1O88935 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.96□□□□□ -0.17
Syn1O88935 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.96□□□□□ -0.17
Syn1O88935 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Syn1O88935 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.96□□□□□ -0.17
Syn1O88935 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Syn1O88935 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syn1O88935 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syn1O88935 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syn1O88935 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Syn1O88935 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syn1O88935 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syn1O88935 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.96□□□□□ -0.18
Syn1O88935 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syn1O88935 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syn1O88935 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Syn1O88935 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syn1O88935 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syn1O88935 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syn1O88935 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.95□□□□□ -0.18
Syn1O88935 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syn1O88935 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Syn1O88935 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syn1O88935 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syn1O88935 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Syn1O88935 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms