Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Gm19078-201ENSMUST00000206311 727 ntBASIC12.35□□□□□ -0.43
Lmx1bO88609 Gm5035-201ENSMUST00000215581 927 ntBASIC12.35□□□□□ -0.43
Lmx1bO88609 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.35□□□□□ -0.43
Lmx1bO88609 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.35□□□□□ -0.43
Lmx1bO88609 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.35□□□□□ -0.43
Lmx1bO88609 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmx1bO88609 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.34□□□□□ -0.43
Lmx1bO88609 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm9002-201ENSMUST00000178437 499 ntBASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.34□□□□□ -0.43
Lmx1bO88609 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.34□□□□□ -0.43
Lmx1bO88609 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmx1bO88609 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Lmx1bO88609 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Lmx1bO88609 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.33□□□□□ -0.44
Lmx1bO88609 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.33□□□□□ -0.44
Lmx1bO88609 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.33□□□□□ -0.44
Lmx1bO88609 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Gm11524-201ENSMUST00000119349 807 ntBASIC12.33□□□□□ -0.44
Lmx1bO88609 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Gm24420-201ENSMUST00000176676 59 ntBASIC12.33□□□□□ -0.44
Lmx1bO88609 Gm29741-201ENSMUST00000192667 421 ntBASIC12.33□□□□□ -0.44
Lmx1bO88609 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lmx1bO88609 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lmx1bO88609 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms