Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.57□□□□□ -0.4
Cops4O88544 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Cops4O88544 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.57□□□□□ -0.4
Cops4O88544 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Cops4O88544 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cops4O88544 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.56□□□□□ -0.4
Cops4O88544 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.56□□□□□ -0.4
Cops4O88544 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.56□□□□□ -0.4
Cops4O88544 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cops4O88544 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.56□□□□□ -0.4
Cops4O88544 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops4O88544 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.56□□□□□ -0.4
Cops4O88544 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.55□□□□□ -0.4
Cops4O88544 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.55□□□□□ -0.4
Cops4O88544 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Cops4O88544 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.55□□□□□ -0.4
Cops4O88544 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.55□□□□□ -0.4
Cops4O88544 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.55□□□□□ -0.4
Cops4O88544 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.55□□□□□ -0.4
Cops4O88544 Gm44771-201ENSMUST00000206975 626 ntBASIC12.55□□□□□ -0.4
Cops4O88544 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.55□□□□□ -0.4
Cops4O88544 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.55□□□□□ -0.4
Cops4O88544 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.55□□□□□ -0.4
Cops4O88544 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.55□□□□□ -0.4
Cops4O88544 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.55□□□□□ -0.4
Cops4O88544 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cops4O88544 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.55□□□□□ -0.4
Cops4O88544 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Cops4O88544 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops4O88544 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cops4O88544 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms