Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.4□□□□□ -0.58
Pfdn2O70591 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.4□□□□□ -0.58
Pfdn2O70591 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.4□□□□□ -0.58
Pfdn2O70591 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.4□□□□□ -0.58
Pfdn2O70591 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.4□□□□□ -0.58
Pfdn2O70591 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.4□□□□□ -0.58
Pfdn2O70591 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pfdn2O70591 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.4□□□□□ -0.58
Pfdn2O70591 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.4□□□□□ -0.58
Pfdn2O70591 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.4□□□□□ -0.58
Pfdn2O70591 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.4□□□□□ -0.58
Pfdn2O70591 Gm10154-201ENSMUST00000084445 354 ntBASIC11.4□□□□□ -0.58
Pfdn2O70591 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn2O70591 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn2O70591 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Pfdn2O70591 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn2O70591 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn2O70591 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn2O70591 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn2O70591 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.39□□□□□ -0.59
Pfdn2O70591 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn2O70591 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn2O70591 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Pfdn2O70591 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn2O70591 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn2O70591 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn2O70591 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn2O70591 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms