Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim1O70400 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim1O70400 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim1O70400 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Pdlim1O70400 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim1O70400 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim1O70400 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.45□□□□□ -0.26
Pdlim1O70400 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.45□□□□□ -0.26
Pdlim1O70400 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Pdlim1O70400 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.45□□□□□ -0.26
Pdlim1O70400 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Gm15371-201ENSMUST00000117057 784 ntBASIC13.45□□□□□ -0.26
Pdlim1O70400 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.45□□□□□ -0.26
Pdlim1O70400 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.45□□□□□ -0.26
Pdlim1O70400 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.45□□□□□ -0.26
Pdlim1O70400 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Pdlim1O70400 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pdlim1O70400 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Pdlim1O70400 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim1O70400 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdlim1O70400 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.44□□□□□ -0.26
Pdlim1O70400 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Gm38223-201ENSMUST00000194484 695 ntBASIC13.44□□□□□ -0.26
Pdlim1O70400 Gm8515-201ENSMUST00000194852 576 ntBASIC13.44□□□□□ -0.26
Pdlim1O70400 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.44□□□□□ -0.26
Pdlim1O70400 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.44□□□□□ -0.26
Pdlim1O70400 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim1O70400 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim1O70400 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim1O70400 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim1O70400 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Pdlim1O70400 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim1O70400 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms