Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.73□□□□□ -0.69
Pde6dO55057 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Pde6dO55057 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.73□□□□□ -0.69
Pde6dO55057 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.73□□□□□ -0.69
Pde6dO55057 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.73□□□□□ -0.69
Pde6dO55057 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.73□□□□□ -0.69
Pde6dO55057 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.73□□□□□ -0.69
Pde6dO55057 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pde6dO55057 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pde6dO55057 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.73□□□□□ -0.69
Pde6dO55057 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pde6dO55057 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pde6dO55057 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Pde6dO55057 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.72□□□□□ -0.69
Pde6dO55057 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.72□□□□□ -0.69
Pde6dO55057 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Pde6dO55057 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Pde6dO55057 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Pde6dO55057 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.72□□□□□ -0.69
Pde6dO55057 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pde6dO55057 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pde6dO55057 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pde6dO55057 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
Pde6dO55057 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.71□□□□□ -0.69
Pde6dO55057 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.71□□□□□ -0.69
Pde6dO55057 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Pde6dO55057 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.71□□□□□ -0.69
Pde6dO55057 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Pde6dO55057 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.71□□□□□ -0.69
Pde6dO55057 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pde6dO55057 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.71□□□□□ -0.69
Pde6dO55057 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms