Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldn5O54942 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cldn5O54942 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Cldn5O54942 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Cldn5O54942 Gm13829-201ENSMUST00000119600 138 ntBASIC14.1□□□□□ -0.15
Cldn5O54942 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.1□□□□□ -0.15
Cldn5O54942 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Gm38671-201ENSMUST00000200573 130 ntBASIC14.1□□□□□ -0.15
Cldn5O54942 Gm6266-201ENSMUST00000203844 806 ntBASIC14.1□□□□□ -0.15
Cldn5O54942 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Gm17794-201ENSMUST00000220252 955 ntBASIC14.1□□□□□ -0.15
Cldn5O54942 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.1□□□□□ -0.15
Cldn5O54942 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.1□□□□□ -0.15
Cldn5O54942 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.1□□□□□ -0.15
Cldn5O54942 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.1□□□□□ -0.15
Cldn5O54942 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn5O54942 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.1□□□□□ -0.15
Cldn5O54942 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn5O54942 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cldn5O54942 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn5O54942 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn5O54942 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn5O54942 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.09□□□□□ -0.15
Cldn5O54942 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cldn5O54942 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn5O54942 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.09□□□□□ -0.15
Cldn5O54942 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.09□□□□□ -0.15
Cldn5O54942 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn5O54942 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn5O54942 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn5O54942 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.08□□□□□ -0.15
Cldn5O54942 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn5O54942 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.08□□□□□ -0.16
Cldn5O54942 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn5O54942 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.08□□□□□ -0.16
Cldn5O54942 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.08□□□□□ -0.16
Cldn5O54942 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.08□□□□□ -0.16
Cldn5O54942 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.08□□□□□ -0.16
Cldn5O54942 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cldn5O54942 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.08□□□□□ -0.16
Cldn5O54942 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.08□□□□□ -0.16
Cldn5O54942 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn5O54942 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn5O54942 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn5O54942 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn5O54942 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cldn5O54942 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.08□□□□□ -0.16
Cldn5O54942 Gm26315-201ENSMUST00000083890 321 ntBASIC14.08□□□□□ -0.16
Cldn5O54942 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms