Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Gm14928-201ENSMUST00000120198 477 ntBASIC13.3□□□□□ -0.28
Npc1O35604 Gm11424-201ENSMUST00000121929 829 ntBASIC13.3□□□□□ -0.28
Npc1O35604 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.3□□□□□ -0.28
Npc1O35604 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
Npc1O35604 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.3□□□□□ -0.28
Npc1O35604 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Npc1O35604 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Gm6180-201ENSMUST00000065243 498 ntBASIC13.3□□□□□ -0.28
Npc1O35604 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
Npc1O35604 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.3□□□□□ -0.28
Npc1O35604 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.3□□□□□ -0.28
Npc1O35604 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Npc1O35604 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Npc1O35604 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Npc1O35604 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Npc1O35604 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.29□□□□□ -0.28
Npc1O35604 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.29□□□□□ -0.28
Npc1O35604 Gm12490-201ENSMUST00000120255 560 ntBASIC13.29□□□□□ -0.28
Npc1O35604 Gm12091-201ENSMUST00000146791 830 ntBASIC13.29□□□□□ -0.28
Npc1O35604 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.29□□□□□ -0.28
Npc1O35604 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Npc1O35604 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.29□□□□□ -0.28
Npc1O35604 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.29□□□□□ -0.28
Npc1O35604 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Npc1O35604 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Npc1O35604 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Npc1O35604 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.29□□□□□ -0.28
Npc1O35604 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.29□□□□□ -0.28
Npc1O35604 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Npc1O35604 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Npc1O35604 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.29□□□□□ -0.28
Npc1O35604 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Npc1O35604 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Npc1O35604 Gm12341-201ENSMUST00000119724 503 ntBASIC13.28□□□□□ -0.28
Npc1O35604 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.28□□□□□ -0.28
Npc1O35604 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.28□□□□□ -0.28
Npc1O35604 Gm5745-201ENSMUST00000183748 313 ntBASIC13.28□□□□□ -0.28
Npc1O35604 Gm6745-201ENSMUST00000199216 526 ntBASIC13.28□□□□□ -0.28
Npc1O35604 Gm18307-201ENSMUST00000206864 949 ntBASIC13.28□□□□□ -0.28
Npc1O35604 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Npc1O35604 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms