Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.3■□□□□ 0.04
Stx1aO35526 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.3■□□□□ 0.04
Stx1aO35526 Gm18889-201ENSMUST00000174284 929 ntBASIC15.3■□□□□ 0.04
Stx1aO35526 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Stx1aO35526 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.3■□□□□ 0.04
Stx1aO35526 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.3■□□□□ 0.04
Stx1aO35526 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Stx1aO35526 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Stx1aO35526 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.3■□□□□ 0.04
Stx1aO35526 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stx1aO35526 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Stx1aO35526 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.29■□□□□ 0.04
Stx1aO35526 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Stx1aO35526 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.29■□□□□ 0.04
Stx1aO35526 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Stx1aO35526 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Stx1aO35526 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.29■□□□□ 0.04
Stx1aO35526 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Stx1aO35526 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Stx1aO35526 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.29■□□□□ 0.04
Stx1aO35526 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.29■□□□□ 0.04
Stx1aO35526 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
Stx1aO35526 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stx1aO35526 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Stx1aO35526 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Stx1aO35526 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.28■□□□□ 0.04
Stx1aO35526 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Gm14494-201ENSMUST00000118786 435 ntBASIC15.28■□□□□ 0.04
Stx1aO35526 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.28■□□□□ 0.04
Stx1aO35526 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Gm29541-201ENSMUST00000191351 678 ntBASIC15.28■□□□□ 0.04
Stx1aO35526 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.28■□□□□ 0.04
Stx1aO35526 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.28■□□□□ 0.04
Stx1aO35526 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Stx1aO35526 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.28■□□□□ 0.04
Stx1aO35526 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.28■□□□□ 0.04
Stx1aO35526 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms