Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Gm27772-201ENSMUST00000184900 187 ntBASIC10.41□□□□□ -0.74
Gm10553J3QPF1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Gm6745-201ENSMUST00000199216 526 ntBASIC10.41□□□□□ -0.74
Gm10553J3QPF1 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10553J3QPF1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm12485-201ENSMUST00000119641 291 ntBASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.4□□□□□ -0.74
Gm10553J3QPF1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm18018-201ENSMUST00000198273 408 ntBASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm45668-201ENSMUST00000211271 493 ntBASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.4□□□□□ -0.74
Gm10553J3QPF1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Gm6180-201ENSMUST00000065243 498 ntBASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10553J3QPF1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10553J3QPF1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Gm10553J3QPF1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Gm10553J3QPF1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Gm11524-201ENSMUST00000119349 807 ntBASIC10.39□□□□□ -0.75
Gm10553J3QPF1 Gm15376-201ENSMUST00000122258 783 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms