Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Gm7899-201ENSMUST00000192935 1897 ntBASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Gm37466-201ENSMUST00000195692 652 ntBASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Tmed9-203ENSMUST00000224741 1450 ntBASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc180J3QNE4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm42872-201ENSMUST00000200026 1967 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm10434-201ENSMUST00000101158 471 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm24830-201ENSMUST00000102024 166 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm13316-201ENSMUST00000140537 691 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm25890-201ENSMUST00000177643 165 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm22614-201ENSMUST00000178300 165 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm22042-201ENSMUST00000082989 165 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm26232-201ENSMUST00000083360 166 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm24136-201ENSMUST00000083374 165 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Gm26110-201ENSMUST00000083971 165 ntBASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc180J3QNE4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Gm13665-201ENSMUST00000120830 528 ntBASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 AC155637.1-201ENSMUST00000218560 636 ntBASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc180J3QNE4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc180J3QNE4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc180J3QNE4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc180J3QNE4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ccdc180J3QNE4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Ccdc180J3QNE4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 AC166051.1-201ENSMUST00000214313 210 ntBASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc180J3QNE4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Gm25668-201ENSMUST00000157700 129 ntBASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 AC132317.1-201ENSMUST00000227227 962 ntBASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc180J3QNE4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms