Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC20.27■□□□□ 0.83
Pcf11G3X9Z4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcf11G3X9Z4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcf11G3X9Z4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcf11G3X9Z4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Gm8738-201ENSMUST00000172606 329 ntBASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcf11G3X9Z4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Mir7221-201ENSMUST00000184009 72 ntBASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Gm37489-201ENSMUST00000191883 159 ntBASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Gm8228-201ENSMUST00000189949 2192 ntBASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Sybu-209ENSMUST00000228639 4113 ntBASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcf11G3X9Z4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Gm24255-201ENSMUST00000104481 128 ntBASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Mospd4-201ENSMUST00000180618 576 ntBASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcf11G3X9Z4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Gm17208-201ENSMUST00000168388 535 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms