Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Gm8749-201ENSMUST00000117737 331 ntBASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Gm4459-201ENSMUST00000118750 468 ntBASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim55G3X8Y1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trim55G3X8Y1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Trim55G3X8Y1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim55G3X8Y1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trim55G3X8Y1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim55G3X8Y1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim55G3X8Y1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gm25745-201ENSMUST00000174945 133 ntBASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Mir8098-201ENSMUST00000184011 137 ntBASIC13.94□□□□□ -0.18
Trim55G3X8Y1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gm43347-201ENSMUST00000200226 580 ntBASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gm5864-201ENSMUST00000202263 970 ntBASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim55G3X8Y1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms