Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh11xF6ZNL5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm15678-201ENSMUST00000117573 960 ntBASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm12859-201ENSMUST00000117834 427 ntBASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh11xF6ZNL5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh11xF6ZNL5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh11xF6ZNL5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh11xF6ZNL5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh11xF6ZNL5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh11xF6ZNL5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh11xF6ZNL5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh11xF6ZNL5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh11xF6ZNL5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms