Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Gm16202-201ENSMUST00000117532 544 ntBASIC16.28■□□□□ 0.2
Ube4aE9Q735 Gm2231-201ENSMUST00000125661 612 ntBASIC16.28■□□□□ 0.2
Ube4aE9Q735 Gm25261-201ENSMUST00000157416 134 ntBASIC16.28■□□□□ 0.2
Ube4aE9Q735 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ube4aE9Q735 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Mir686-201ENSMUST00000102174 109 ntBASIC16.27■□□□□ 0.2
Ube4aE9Q735 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Gm25927-201ENSMUST00000175058 117 ntBASIC16.27■□□□□ 0.2
Ube4aE9Q735 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Gm43118-201ENSMUST00000199149 775 ntBASIC16.27■□□□□ 0.2
Ube4aE9Q735 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.27■□□□□ 0.2
Ube4aE9Q735 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ube4aE9Q735 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4aE9Q735 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.27■□□□□ 0.19
Ube4aE9Q735 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.26■□□□□ 0.19
Ube4aE9Q735 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Gm8805-201ENSMUST00000117848 313 ntBASIC16.26■□□□□ 0.19
Ube4aE9Q735 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.26■□□□□ 0.19
Ube4aE9Q735 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.26■□□□□ 0.19
Ube4aE9Q735 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.26■□□□□ 0.19
Ube4aE9Q735 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.26■□□□□ 0.19
Ube4aE9Q735 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Ube4aE9Q735 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4aE9Q735 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4aE9Q735 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.25■□□□□ 0.19
Ube4aE9Q735 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms