Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Defa-ps17-201ENSMUST00000121849 171 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm11783-201ENSMUST00000119549 885 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm13182-201ENSMUST00000122241 312 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm15573-201ENSMUST00000119487 540 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm12783-201ENSMUST00000121425 397 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Gm6855-201ENSMUST00000206307 790 ntBASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a3E9PWQ3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Gm4868-201ENSMUST00000164138 789 ntBASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a3E9PWQ3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms