Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.35□□□□□ -0.43
Gm3543D3Z235 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.35□□□□□ -0.43
Gm3543D3Z235 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Gm3543D3Z235 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.34□□□□□ -0.43
Gm3543D3Z235 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Gm11424-201ENSMUST00000121929 829 ntBASIC12.34□□□□□ -0.43
Gm3543D3Z235 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Gm37714-201ENSMUST00000194742 342 ntBASIC12.34□□□□□ -0.43
Gm3543D3Z235 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.34□□□□□ -0.43
Gm3543D3Z235 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm3543D3Z235 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Gm3543D3Z235 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.33□□□□□ -0.43
Gm3543D3Z235 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Gm3543D3Z235 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Acot6-202ENSMUST00000222921 3622 ntBASIC12.33□□□□□ -0.44
Gm3543D3Z235 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Gm5745-201ENSMUST00000183748 313 ntBASIC12.33□□□□□ -0.44
Gm3543D3Z235 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.33□□□□□ -0.44
Gm3543D3Z235 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm3543D3Z235 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms