Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 Gm9368-201ENSMUST00000219348 831 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.19□□□□□ -0.46
Shank1D3YZU1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shank1D3YZU1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.18□□□□□ -0.46
Shank1D3YZU1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.18□□□□□ -0.46
Shank1D3YZU1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.18□□□□□ -0.46
Shank1D3YZU1 Mir5132-201ENSMUST00000175166 71 ntBASIC12.18□□□□□ -0.46
Shank1D3YZU1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.18□□□□□ -0.46
Shank1D3YZU1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.18□□□□□ -0.46
Shank1D3YZU1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shank1D3YZU1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.17□□□□□ -0.46
Shank1D3YZU1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.17□□□□□ -0.46
Shank1D3YZU1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.17□□□□□ -0.46
Shank1D3YZU1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms