Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb1A2AQ07 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.96□□□□□ -0.17
Tubb1A2AQ07 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb1A2AQ07 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.96□□□□□ -0.17
Tubb1A2AQ07 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubb1A2AQ07 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tubb1A2AQ07 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb1A2AQ07 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb1A2AQ07 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb1A2AQ07 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Tubb1A2AQ07 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb1A2AQ07 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb1A2AQ07 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubb1A2AQ07 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tubb1A2AQ07 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.94□□□□□ -0.18
Tubb1A2AQ07 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubb1A2AQ07 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.93□□□□□ -0.18
Tubb1A2AQ07 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms