Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav12d-1A0N8R0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav12d-1A0N8R0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav12d-1A0N8R0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav12d-1A0N8R0 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Gm6916-202ENSMUST00000205523 195 ntBASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav12d-1A0N8R0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Mir874-201ENSMUST00000104769 76 ntBASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Gm18889-201ENSMUST00000174284 929 ntBASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Dupd1-202ENSMUST00000224735 548 ntBASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms