Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gm15920-201ENSMUST00000118998 402 ntBASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gm9522-201ENSMUST00000182394 926 ntBASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lnp1A0A1B0GSK3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lnp1A0A1B0GSK3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lnp1A0A1B0GSK3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Lnp1A0A1B0GSK3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lnp1A0A1B0GSK3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lnp1A0A1B0GSK3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm20949-201ENSMUST00000206478 952 ntBASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms