Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm10154-201ENSMUST00000084445 354 ntBASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm45098-201ENSMUST00000207179 657 ntBASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Matn2-203ENSMUST00000226766 3252 ntBASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms