Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Mir7684-201ENSMUST00000183858 60 ntBASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Mir8102-201ENSMUST00000184148 139 ntBASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Gm17795-201ENSMUST00000214505 757 ntBASIC13.65□□□□□ -0.22
H2afb2S4R1M3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb2S4R1M3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
H2afb2S4R1M3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Gm12151-201ENSMUST00000121374 290 ntBASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb2S4R1M3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm15770-201ENSMUST00000117498 584 ntBASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm15487-201ENSMUST00000122373 465 ntBASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm27838-201ENSMUST00000184829 128 ntBASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm27772-201ENSMUST00000184900 187 ntBASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb2S4R1M3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms