Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm6912-201ENSMUST00000117218 544 ntBASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm10275-202ENSMUST00000168697 495 ntBASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm45384-201ENSMUST00000210451 277 ntBASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm10275-201ENSMUST00000092620 635 ntBASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mrpl40Q9Z2Q5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm12585-201ENSMUST00000117307 290 ntBASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm11478-201ENSMUST00000117851 599 ntBASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm21854-201ENSMUST00000179901 471 ntBASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm15823-201ENSMUST00000064305 670 ntBASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mrpl40Q9Z2Q5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Gm18187-201ENSMUST00000196476 984 ntBASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mrpl40Q9Z2Q5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms