Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Mir8102-201ENSMUST00000184148 139 ntBASIC12.79□□□□□ -0.36
Cldn6Q9Z262 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Gm17795-201ENSMUST00000214505 757 ntBASIC12.79□□□□□ -0.36
Cldn6Q9Z262 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn6Q9Z262 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Mir7684-201ENSMUST00000183858 60 ntBASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn6Q9Z262 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.77□□□□□ -0.36
Cldn6Q9Z262 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Gm27838-201ENSMUST00000184829 128 ntBASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Gm29667-201ENSMUST00000190817 490 ntBASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Gm20445-201ENSMUST00000061905 565 ntBASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn6Q9Z262 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms