Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn8aQ9WTU3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm8062-201ENSMUST00000139696 444 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Mir686-201ENSMUST00000102174 109 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn8aQ9WTU3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn8aQ9WTU3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms