Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.14□□□□□ -0.47
Nubp2Q9R061 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Gm7730-201ENSMUST00000212486 454 ntBASIC12.14□□□□□ -0.47
Nubp2Q9R061 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Gm9229-201ENSMUST00000222777 126 ntBASIC12.14□□□□□ -0.47
Nubp2Q9R061 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.14□□□□□ -0.47
Nubp2Q9R061 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nubp2Q9R061 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Syt7-204ENSMUST00000223586 1344 ntBASIC12.13□□□□□ -0.47
Nubp2Q9R061 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 BC001981-202ENSMUST00000191393 1545 ntBASIC12.13□□□□□ -0.47
Nubp2Q9R061 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.13□□□□□ -0.47
Nubp2Q9R061 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nubp2Q9R061 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.12□□□□□ -0.47
Nubp2Q9R061 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.12□□□□□ -0.47
Nubp2Q9R061 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.12□□□□□ -0.47
Nubp2Q9R061 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nubp2Q9R061 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms