Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn11aQ9R053 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn11aQ9R053 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Scn11aQ9R053 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.89■□□□□ 0.14
Scn11aQ9R053 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.89■□□□□ 0.13
Scn11aQ9R053 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.89■□□□□ 0.13
Scn11aQ9R053 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn11aQ9R053 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.88■□□□□ 0.13
Scn11aQ9R053 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Gm2231-201ENSMUST00000125661 612 ntBASIC15.88■□□□□ 0.13
Scn11aQ9R053 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.88■□□□□ 0.13
Scn11aQ9R053 B9d1os-201ENSMUST00000137010 674 ntBASIC15.88■□□□□ 0.13
Scn11aQ9R053 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Gm24548-201ENSMUST00000158650 108 ntBASIC15.88■□□□□ 0.13
Scn11aQ9R053 Gm6621-201ENSMUST00000193251 772 ntBASIC15.88■□□□□ 0.13
Scn11aQ9R053 Gm7046-201ENSMUST00000221351 977 ntBASIC15.88■□□□□ 0.13
Scn11aQ9R053 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn11aQ9R053 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Gm8805-201ENSMUST00000117848 313 ntBASIC15.87■□□□□ 0.13
Scn11aQ9R053 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.87■□□□□ 0.13
Scn11aQ9R053 Mir7221-201ENSMUST00000184009 72 ntBASIC15.87■□□□□ 0.13
Scn11aQ9R053 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn11aQ9R053 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Scn11aQ9R053 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms