Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Six6Q9QZ28 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Six6Q9QZ28 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six6Q9QZ28 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Six6Q9QZ28 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Six6Q9QZ28 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Six6Q9QZ28 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Six6Q9QZ28 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.52□□□□□ -0.57
Six6Q9QZ28 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.52□□□□□ -0.57
Six6Q9QZ28 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.52□□□□□ -0.57
Six6Q9QZ28 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.52□□□□□ -0.57
Six6Q9QZ28 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.52□□□□□ -0.57
Six6Q9QZ28 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Six6Q9QZ28 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.51□□□□□ -0.57
Six6Q9QZ28 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Gm6089-201ENSMUST00000197666 938 ntBASIC11.51□□□□□ -0.57
Six6Q9QZ28 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.51□□□□□ -0.57
Six6Q9QZ28 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Six6Q9QZ28 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Six6Q9QZ28 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.5□□□□□ -0.57
Six6Q9QZ28 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.5□□□□□ -0.57
Six6Q9QZ28 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Six6Q9QZ28 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Six6Q9QZ28 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms